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What would be an ideal environment/manner to judge the effectiveness of multiple segmentation algorithms? The goal is to determine which algorithms provide the best results for pre-clinical imaging. Our group has considered a GUI in MATLAB, and have different modules for different algorithms. Various papers have conducted such algorithm analyses in clinical scenarios, but none give an indication to their environment.

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  • $\begingroup$ "Ideal" is subjective / a matter of opinion, and subjective questions are typically not a good fit here. What are you trying to achieve? What approaches have you considered? What are your goals? What research have you done/ Please edit your question to flesh it out in considerably more detail. $\endgroup$ – D.W. Jul 7 '15 at 18:33
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Google "image segmentation benchmark". You will find various data sets with ground truth, such as this one.

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