I'm having a problem understanding this conversion. Let's say we have a CFL like this: $ { a^nb^m : n > m } $
A final state acceptance PDA for this language would push $A$ symbols in the stack for every 'a' input, and pop them for every 'b' input. If the stack has no more $A$s while we still have 'b' inputs to process, the automaton goes in a non-accepting state, and the string is not accepted.
To convert this to an empty stack acceptance PDA, I add the two states, one before the previous start state, and another state after the last to empty the stack. Whenever the inner automaton goes to the accepting state, it also moves to the empty-stack state with an $\epsilon$ transition.
If I test the string $aabbb$, after we process the first 3 characters, we still have an $A$ symbol in the stack, but the automaton moves to the empty-stack state with an $\epsilon$, it empties the whole stack, therefore the string is accepted.
Where is my mistake in this reasoning?