It's possible to build a data structure that in practice has $O(\lg n)$ lookup, $O(\lg n)$ insertion, and $O(1)$ equality-tests. I'll describe how below. (If you care about theoretical worst-case complexity, there are some caveats, but those caveats can probably be ignored for practical implementation.)
You can handle the lookup, insertion, and creation operations using a balanced binary search tree on the endpoints of the intervals. If you have $n$ intervals, you'll have at most $2n$ endpoints, so you have a balanced tree on $O(n)$ leaves. Lookup and insertion can be done in $O(\lg n)$ time, using an appropriate balanced tree data structure, which is efficient.
Ensuring it has a canonical representation is difficult; I don't know how to do that, while ensuring efficiency. The standard data structures don't have a canonical representation: there are many possibilities for the structure of the tree, for any given contents, and they use these degrees of freedom to help make the operations efficient.
But we can still support the "equality-test" operation efficient, without needing a canonical representation. We'll construct a custom hash function, which produces a hash value $H(f)$ based on the contents of the map $f$ (regardless of the underlying structure of the tree or how the map is stored). Then we can do efficient equality tests: given two maps, we compare their hashes. If their hashes are different, we know they are different maps. If their hashes are the same, we can compare them exhaustively; with a reasonable hash function, the chances of two different maps yielding the same hash will have negligible probability. If you use a cryptographic-strength hash, that possibility is so exponentially rare that you can use a simpler procedure: if the hashes match, then the maps match, and there's no need to check any further. This yields a procedure that is $O(1)$ time to compare equality in practice.
So how do we build the hash function $H$? We'll use an associative hash function. Let $(G,+)$ be an abelian group, and a conventional hash function $h:\{0,1\}^* \to G$. Suppose the map $f$ maps the interval $[\ell_i,u_i]$ to the value $v_i$ for $i=1,2,\dots,n$. Then we'll define the hash of $f$ to be
$$H(f) = \sum_{i=1}^n h(\ell_i,u_i,v_i).$$
Notice that the hash value depends only on the map itself, and not on the structure of the tree used to store the map.
We'll update the hash of the map each time that we update the data structure. This is easy to do, thanks to the structure of $f$ and the fact that $+$ is commutative (since $G$ is abelian). If the map $f'$ is defined by removing an interval $[\ell,u] \mapsto v$ from the map $f$, then their hashes are related by
$$H(f') = H(f) - h(\ell,u,v),$$
which can be computed in $O(1)$ time. Similarly for adding an interval that doesn't overlap any other intervals. Adding an interval that overlaps an existing interval (triggering a split) can be done by deleting the existing intervals and adding in the new intervals. Each of these operations takes $O(1)$ time.
(Alternatively, you can choose a non-abelian group $G$ and then augment the binary tree: in each node, you store the hash of the map that corresponds to the subtree rooted at that node. In this way you can update the hash values for all nodes each time you update the tree.)
It remains to instantiate the hash $H$ by choosing an appropriate group $G$ and an appropriate hash $h$. I suggest that you use a cryptographic hash function for $h$, such as SHA256; that way you can treat collisions as effectively impossible in practice. You can find analysis of how to choose the group $G$ in the cryptographic literature: see https://crypto.stackexchange.com/q/11420/351, https://crypto.stackexchange.com/a/17936/351, and https://crypto.stackexchange.com/q/8615/351.